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Back to Colloquia
Physics Colloquium Friday, Dec. 1st, 2006,
4:00 P.M.
E300 Math/Science
Center; Refreshments at 3:30 P.M. in
Room E200
University of Colorado
Motor protein interaction with obstacles and helicase
unwinding of DNA
Molecular motors are small machines that move and do work in
cells. These motor proteins are required for many important
biological
processes and are of interest as prototypes of nanoscale
machines. This talk will describe a theory of motor proteins
that move
obstacles, using the unwinding of double-stranded DNA
molecules by
helicase proteins as an example. The results predict how the
coupling
between translocation and unwinding affects the unwinding
velocity and
processivity of a helicase, as well as collective effects
which occur
when multiple helicases unwind DNA. We compare the
predictions to
experimental results, including dependence on the interaction
potential, helicase step size, and average base-pair binding
free
energy.
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